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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
snATAC-seq
10
ChIP-seq
Assay category
38
DNA accessibility
10
DNA binding
Target of assay
7
transcription factor
2
RNA binding protein
2
histone
2
histone modification
1
broad histone mark
1
control
1
narrow histone mark
Date released
21
May, 2022
17
February, 2021
8
August, 2017
2
October, 2018
Available data
27
fastq
21
zippedFastqFolder
10
bam
9
bigWig
3
bed bed3+
1
bed narrowPeak
1
bigBed narrowPeak
Organism
48
Homo sapiens
Biosample type
38
primary cell
5
in vitro differentiated cells
5
tissue
Organ
5
connective tissue
5
pancreas
Project
38
HPAP
10
AMP
Genome assembly (visualization)
9
GRCh38
9
hg19
Lab
38
Klaus Kaestner, Upenn
10
AMP-T2D consortium
Audit category:
17
audit script error
Audit category:
8
missing controlled_by
files.platform.term_name!
Illumina HiSeq 2000
BIOSAMPLE
ASSAY
48 results
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snATAC-seq
ChIP-seq
primary cell
Langerhans cell
38
in vitro differentiated cells
adipocyte
5
tissue
islet of Langerhans
3
pancreas
2
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