Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
ChIP-seq
10
ATAC-seq
1
single cell RNA-seq
Assay category
92
DNA binding
10
DNA accessibility
1
Transcription
Target of assay
65
histone
65
histone modification
37
broad histone mark
28
narrow histone mark
18
transcription factor
12
RNA binding protein
10
chromatin remodeller
9
control
Date released
31
August, 2017
21
December, 2017
21
October, 2018
12
January, 2019
7
August, 2020
4
September, 2020
3
November, 2018
2
December, 2018
2
November, 2017
Available data
102
fastq
93
bigWig
92
bam
83
bed narrowPeak
53
bigBed narrowPeak
1
zippedFastqFolder
Organism
103
Homo sapiens
Biosample type
46
in vitro differentiated cells
34
tissue
12
cell line
11
primary cell
Organ
32
connective tissue
30
pancreas
25
epithelium
23
liver
10
blood
10
bodily fluid
7
spleen
1
adipose tissue
Project
92
AMP
11
HPAP
Genome assembly (visualization)
93
GRCh38
83
hg19
Lab
92
AMP-T2D consortium
11
Klaus Kaestner, Upenn
Audit category:
1
inconsistent control
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
files.platform.term_name!
Illumina HiSeq 2000
BIOSAMPLE
ASSAY
103 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
single cell RNA-seq
in vitro differentiated cells
adipocyte
31
hepatocyte
15
tissue
body of pancreas
20
spleen
7
right lobe of liver
6
omental fat pad
1
cell line
GM12878
10
HepG2
2
primary cell
pancreatic alpha cell
7
pancreatic beta cell
3
Langerhans cell
1
Download