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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
237
ChIP-seq
9
WGBS
6
RRBS
5
ATAC-seq
3
DNase-seq
1
FAIRE-seq
Assay category
237
DNA binding
15
DNA methylation
9
DNA accessibility
Target of assay
166
histone modification
165
histone
92
broad histone mark
72
narrow histone mark
42
control
29
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
715
February, 2021
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
261
August, 2017
233
November, 2017
218
June, 2019
205
February, 2023
200
May, 2022
143
July, 2018
120
May, 2019
108
July, 2019
80
April, 2019
64
March, 2020
61
November, 2019
59
December, 2017
59
October, 2018
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
38
November, 2018
31
December, 2018
25
February, 2018
25
February, 2020
19
April, 2020
18
January, 2019
16
January, 2021
16
November, 2020
15
May, 2023
15
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
2
June, 2018
1
August, 2022
1
September, 2018
Available data
137
fastq
132
bam
130
bigWig
119
bed narrowPeak
79
tagAlign
34
bed broadPeak
23
bigBed narrowPeak
21
bed bed3+
13
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
260
Homo sapiens
Biosample type
151
tissue
65
in vitro differentiated cells
45
primary cell
Organ
108
connective tissue
68
pancreas
43
adipose tissue
43
liver
29
epithelium
26
musculature of body
Project
261
AMP
Genome assembly (visualization)
133
hg19
107
GRCh38
Lab
261
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
11
inconsistent control read length
1
inconsistent assembly
files.platform.term_name!
Illumina HiSeq 2000
BIOSAMPLE
ASSAY
261 results
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Clear Filters
ChIP-seq
WGBS
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
liver
37
3
1
subcutaneous abdominal adipose tissue
36
3
islet of Langerhans
36
1
1
skeletal muscle tissue
22
4
adipose tissue
3
+ See 3 more…
in vitro differentiated cells
adipocyte
65
primary cell
skeletal muscle myoblast
14
1
1
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic acinar cell
1
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