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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 237ChIP-seq
  • 9WGBS
  • 6RRBS
  • 5ATAC-seq
  • 3DNase-seq
  • 1FAIRE-seq
Assay category
  • 237DNA binding
  • 15DNA methylation
  • 9DNA accessibility
Target of assay
  • 166histone modification
  • 165histone
  • 92broad histone mark
  • 72narrow histone mark
  • 42control
  • 29transcription factor
  • 8RNA binding protein
  • 3chromatin remodeller
Date released
  • 715February, 2021
  • 399May, 2021
  • 341May, 2020
  • 319August, 2021
  • 314October, 2019
  • 261August, 2017
  • 233November, 2017
  • 218June, 2019
  • 205February, 2023
  • 200May, 2022
  • 143July, 2018
  • 120May, 2019
  • 108July, 2019
  • 80April, 2019
  • 64March, 2020
  • 61November, 2019
  • 59December, 2017
  • 59October, 2018
  • 59September, 2020
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 38November, 2018
  • 31December, 2018
  • 25February, 2018
  • 25February, 2020
  • 19April, 2020
  • 18January, 2019
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 15October, 2017
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4October, 2022
  • 3August, 2018
  • 2June, 2018
  • 1August, 2022
  • 1September, 2018
Available data
  • 137fastq
  • 132bam
  • 130bigWig
  • 119bed narrowPeak
  • 79tagAlign
  • 34bed broadPeak
  • 23bigBed narrowPeak
  • 21bed bed3+
  • 13bigBed broadPeak
  • 6bed bedMethyl
  • 6bigBed bedMethyl
Organism
  • 260Homo sapiens
Biosample type
  • 151tissue
  • 65in vitro differentiated cells
  • 45primary cell
Organ
  • 108connective tissue
  • 68pancreas
  • 43adipose tissue
  • 43liver
  • 29epithelium
  • 26musculature of body
Project
  • 261AMP
Genome assembly (visualization)
  • 133hg19
  • 107GRCh38
Lab
  • 261AMP-T2D consortium
Audit category:
  • 9missing controlled_by
Audit category:
  • 11inconsistent control read length
  • 1inconsistent assembly
files.platform.term_name!
  • Illumina HiSeq 2000
BIOSAMPLE
ASSAY

261 results

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Clear Filters
ChIP-seq
WGBS
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
liver3731
subcutaneous abdominal adipose tissue363
islet of Langerhans3611
skeletal muscle tissue224
adipose tissue3
in vitro differentiated cells
adipocyte65
primary cell
skeletal muscle myoblast1411
pancreatic alpha cell131
pancreatic beta cell131
pancreatic acinar cell1
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