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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
7
DNase-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
22
DNA binding
8
DNA accessibility
7
DNA methylation
1
Transcription
Target of assay
20
transcription factor
10
RNA binding protein
6
chromatin remodeller
2
control
Date released
715
February, 2021
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
261
August, 2017
233
November, 2017
218
June, 2019
205
February, 2023
200
May, 2022
143
July, 2018
120
May, 2019
108
July, 2019
80
April, 2019
64
March, 2020
61
November, 2019
59
December, 2017
59
October, 2018
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
38
November, 2018
31
December, 2018
25
February, 2018
25
February, 2020
19
April, 2020
18
January, 2019
16
January, 2021
16
November, 2020
15
May, 2023
15
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
2
June, 2018
1
August, 2022
1
September, 2018
Available data
38
fastq
37
bam
35
bigWig
28
bed narrowPeak
28
bigBed narrowPeak
7
bed bed3+
7
bed bedMethyl
7
bed broadPeak
7
bigBed bedMethyl
7
bigBed broadPeak
1
csv
Organism
38
Homo sapiens
Biosample type
23
cell line
14
tissue
1
primary cell
Organ
16
liver
9
blood
9
bodily fluid
7
pancreas
3
spleen
1
adipose tissue
1
brain
1
connective tissue
Project
38
AMP
Genome assembly (visualization)
34
GRCh38
28
hg19
Lab
38
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
4
inconsistent control read length
4
inconsistent control run_type
files.platform.term_name!
Illumina HiSeq 2000
BIOSAMPLE
ASSAY
38 results
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ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
13
1
GM12878
9
tissue
body of pancreas
2
2
pancreas
2
1
spleen
1
2
brain
1
liver
1
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primary cell
pancreatic cell
1
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