Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 14ChIP-seq
  • 2WGBS
  • 1ATAC-seq
  • 1DNase-seq
  • 1pCHi-C
Assay category
  • 14DNA binding
  • 2DNA accessibility
  • 2DNA methylation
Target of assay
  • 6histone
  • 6histone modification
  • 5control
  • 4broad histone mark
  • 3transcription factor
  • 2narrow histone mark
Date released
  • 7December, 2018
  • 7January, 2019
  • 3November, 2018
  • 1March, 2020
  • 1October, 2017
Available data
  • 18bam
  • 18fastq
  • 13bigWig
  • 11bed narrowPeak
  • 10bigBed narrowPeak
  • 2bed bedMethyl
  • 2bigBed bedMethyl
  • 1bed bed3+
  • 1bed broadPeak
  • 1bigBed broadPeak
  • 1tsv
Organism
  • 19Homo sapiens
Biosample type
  • 19tissue
Organ
  • 727pancreas
  • 652connective tissue
  • 529liver
  • 464adipose tissue
  • 446epithelium
  • 393heart
  • 354kidney
  • 281brain
  • 236vasculature
  • 230blood vessel
  • 159bone element
  • 141artery
  • 122limb
  • 96musculature of body
  • 61eye
  • 53blood
  • 53bodily fluid
  • 43nerve
  • 33embryo
  • 22vein
  • 20lung
  • 19spleen
  • 18ureter
  • 16skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 19AMP
Genome assembly (visualization)
  • 13GRCh38
  • 11hg19
Lab
  • 19AMP-T2D consortium
files.platform.term_name!
  • Illumina HiSeq 2000
BIOSAMPLE
ASSAY

19 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
WGBS
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen142111
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego