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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 88ChIP-seq
Assay category
  • 88DNA binding
Target of assay
  • 948histone modification
  • 947histone
  • 483narrow histone mark
  • 463broad histone mark
  • 285transcription factor
  • 267control
  • 88RNA binding protein
  • 27chromatin remodeller
  • 7recombinant protein
  • 5nucleotide modification
  • 2other context
  • 2other post-translational modification
Date released
  • 27November, 2017
  • 10November, 2018
  • 8August, 2017
  • 8October, 2018
  • 5May, 2019
  • 5May, 2021
  • 5May, 2024
  • 4April, 2019
  • 4December, 2017
  • 4January, 2019
  • 4June, 2019
  • 2December, 2018
  • 1August, 2021
  • 1November, 2019
Available data
  • 82bigWig
  • 81bed narrowPeak
  • 77bam
  • 69bigBed narrowPeak
  • 63fastq
  • 8bed broadPeak
  • 8bigBed broadPeak
  • 2bed bed3+
  • 1tar
Organism
  • 88Homo sapiens
Biosample type
  • 42cell line
  • 25tissue
  • 11in vitro differentiated cells
  • 10primary cell
Organ
  • 37liver
  • 11heart
  • 8blood
  • 8bodily fluid
  • 8connective tissue
  • 8epithelium
  • 8pancreas
  • 5vasculature
  • 4blood vessel
  • 3adipose tissue
  • 3brain
  • 3kidney
  • 1artery
  • 1eye
Project
  • 88AMP
Genome assembly (visualization)
  • 76GRCh38
  • 76hg19
Lab
  • 77AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Patrick T. Ellinor, Broad
  • 1Bing Ren, UCSD
Audit category:
  • 4inconsistent ontology term
Audit category:
  • 3missing controlled_by
Audit category:
  • 4inconsistent control read length
  • 3inconsistent control run_type
files.platform.term_name!
  • Illumina HiSeq 2000
BIOSAMPLE
ASSAY

88 results

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Clear Filters
ChIP-seq
cell line
HepG233
GM128788
EndoC_BH11
tissue
left cardiac atrium5
body of pancreas4
heart left ventricle3
omental fat pad3
islet of Langerhans2
in vitro differentiated cells
embryonic stem cell5
adipocyte4
hepatocyte2
primary cell
skeletal muscle myoblast2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
cardiac fibroblast1
cardiac muscle cell1
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