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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 26ChIP-seq
Assay category
  • 26DNA binding
Target of assay
  • 13control
  • 10transcription factor
  • 9RNA binding protein
  • 2histone
  • 2histone modification
  • 1broad histone mark
  • 1narrow histone mark
Date released
  • 16November, 2017
  • 6November, 2018
  • 2August, 2017
  • 2February, 2018
Available data
  • 26bam
  • 26fastq
  • 12bed narrowPeak
  • 12bigWig
  • 8bigBed narrowPeak
  • 2bed bed3+
Organism
  • 26Homo sapiens
Biosample type
  • 22cell line
  • 4in vitro differentiated cells
Organ
  • 22liver
  • 2connective tissue
Project
  • 26AMP
Genome assembly (visualization)
  • 12GRCh38
  • 12hg19
Lab
  • 26AMP-T2D consortium
Audit category:
  • 3inconsistent control read length
files.platform.term_name!
  • Illumina HiSeq 2500
BIOSAMPLE
ASSAY

26 results

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ChIP-seq
cell line
HepG222
in vitro differentiated cells
adipocyte2
definitive endodermal cell2
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