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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
9
ChIP-seq
Assay category
14
Transcription
9
DNA binding
Target of assay
6
histone
6
histone modification
3
broad histone mark
3
control
3
narrow histone mark
Date released
13
February, 2018
8
August, 2021
2
May, 2021
Available data
23
bam
20
bigWig
14
tsv
13
fastq
6
bed narrowPeak
Organism
23
Homo sapiens
Biosample type
15
in vitro differentiated cells
8
cell line
Organ
895
pancreas
729
liver
675
connective tissue
487
adipose tissue
479
epithelium
393
heart
354
kidney
284
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
61
eye
59
blood
59
bodily fluid
43
nerve
23
embryo
22
vein
20
lung
18
spleen
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
23
AMP
Genome assembly (visualization)
20
GRCh38
20
hg19
Lab
23
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.platform.term_name!
Illumina HiSeq 2500
BIOSAMPLE
ASSAY
23 results
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total RNA-seq
ChIP-seq
in vitro differentiated cells
pancreatic endoderm
4
9
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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