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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 79ChIP-seq
Assay category
  • 79DNA binding
Target of assay
  • 960histone modification
  • 959histone
  • 487narrow histone mark
  • 471broad histone mark
  • 456transcription factor
  • 323control
  • 89recombinant protein
  • 79RNA binding protein
  • 16chromatin remodeller
  • 5nucleotide modification
  • 5other context
  • 5other post-translational modification
Date released
  • 22November, 2017
  • 10October, 2018
  • 8August, 2017
  • 8November, 2018
  • 5May, 2019
  • 5May, 2021
  • 5May, 2024
  • 4April, 2019
  • 4June, 2019
  • 2December, 2017
  • 2December, 2018
  • 2January, 2019
  • 1August, 2021
  • 1November, 2019
Available data
  • 72bigWig
  • 71bed narrowPeak
  • 68bam
  • 59bigBed narrowPeak
  • 54fastq
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 2bed bed3+
  • 1tar
Organism
  • 79Homo sapiens
Biosample type
  • 33cell line
  • 27tissue
  • 10primary cell
  • 9in vitro differentiated cells
Organ
  • 29liver
  • 11heart
  • 10connective tissue
  • 8pancreas
  • 6epithelium
  • 5adipose tissue
  • 5blood
  • 5bodily fluid
  • 5vasculature
  • 4blood vessel
  • 3brain
  • 3kidney
  • 1artery
  • 1eye
Project
  • 79AMP
Genome assembly (visualization)
  • 67GRCh38
  • 67hg19
Lab
  • 68AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Patrick T. Ellinor, Broad
  • 1Bing Ren, UCSD
Audit category:
  • 4inconsistent ontology term
Audit category:
  • 1missing controlled_by
Audit category:
  • 2inconsistent control read length
files.platform.term_name!
  • Illumina HiSeq 2500
BIOSAMPLE
ASSAY

79 results

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Clear Filters
ChIP-seq
cell line
HepG227
GM128785
EndoC_BH11
tissue
left cardiac atrium5
body of pancreas4
heart left ventricle3
omental fat pad3
islet of Langerhans2
primary cell
skeletal muscle myoblast2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
cardiac fibroblast1
cardiac muscle cell1
in vitro differentiated cells
embryonic stem cell5
adipocyte4
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