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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 16ChIP-seq
Assay category
  • 16DNA binding
Target of assay
  • 960histone modification
  • 959histone
  • 487narrow histone mark
  • 471broad histone mark
  • 456transcription factor
  • 323control
  • 89recombinant protein
  • 79RNA binding protein
  • 16chromatin remodeller
  • 5nucleotide modification
  • 5other context
  • 5other post-translational modification
Date released
  • 9November, 2017
  • 3August, 2017
  • 2December, 2017
  • 2January, 2019
Available data
  • 16bam
  • 16bed narrowPeak
  • 16bigWig
  • 16fastq
  • 14bigBed narrowPeak
  • 5bed broadPeak
  • 5bigBed broadPeak
Organism
  • 16Homo sapiens
Biosample type
  • 11cell line
  • 2in vitro differentiated cells
  • 2tissue
  • 1primary cell
Organ
  • 11liver
  • 2blood
  • 2bodily fluid
  • 2connective tissue
Project
  • 16AMP
Genome assembly (visualization)
  • 16GRCh38
  • 16hg19
Lab
  • 16AMP-T2D consortium
Audit category:
  • 2inconsistent control
Audit category:
  • 3inconsistent control read length
files.platform.term_name!
  • Illumina HiSeq 2500
BIOSAMPLE
ASSAY

16 results

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Clear Filters
ChIP-seq
cell line
HepG29
GM128782
in vitro differentiated cells
adipocyte2
tissue
liver2
primary cell
skeletal muscle myoblast1
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