Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 199total RNA-seq
  • 7ChIP-seq
  • 1DNase-seq
  • 1WGBS
Assay category
  • 199Transcription
  • 7DNA binding
  • 1DNA accessibility
  • 1DNA methylation
Target of assay
  • 7transcription factor
Date released
  • 93August, 2017
  • 76February, 2023
  • 26September, 2018
  • 6February, 2018
  • 2November, 2017
  • 2November, 2018
  • 2October, 2018
  • 1December, 2018
Available data
  • 208fastq
  • 132bam
  • 132bigWig
  • 123tsv
  • 5bed narrowPeak
  • 5bigBed narrowPeak
  • 1bed bedMethyl
  • 1bed broadPeak
  • 1bigBed bedMethyl
  • 1bigBed broadPeak
Organism
  • 208Homo sapiens
Biosample type
  • 105primary cell
  • 93tissue
  • 6in vitro differentiated cells
  • 4cell line
Organ
  • 155pancreas
  • 65epithelium
  • 3adipose tissue
  • 3connective tissue
  • 2blood
  • 2bodily fluid
  • 2liver
  • 1embryo
Project
  • 132AMP
  • 76HPAP
Genome assembly (visualization)
  • 131GRCh38
  • 131hg19
Lab
  • 132AMP-T2D consortium
  • 76Klaus Kaestner, Upenn
Audit category:
  • 3missing controlled_by
files.platform.term_name!
  • Illumina HiSeq 4000
BIOSAMPLE
ASSAY

208 results

search-icontable-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
WGBS
primary cell
exocrine cell39
pancreatic alpha cell37
pancreatic beta cell20
pancreatic acinar cell4
pancreatic ductal cell4
skeletal muscle myoblast1
tissue
islet of Langerhans89
white adipose tissue3
pancreas1
in vitro differentiated cells
definitive endodermal cell1
embryonic stem cell1
endocrine cell1
pancreatic endoderm1
posterior foregut1
primitive gut cell1
cell line
GM128782
HepG22
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego