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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 101ChIP-seq
  • 1DNase-seq
Assay category
  • 101DNA binding
  • 1DNA accessibility
Target of assay
  • 49transcription factor
  • 38histone
  • 38histone modification
  • 20narrow histone mark
  • 18broad histone mark
  • 14control
  • 12RNA binding protein
  • 1chromatin remodeller
  • 1other context
  • 1other post-translational modification
Date released
  • 54November, 2017
  • 44August, 2017
  • 2October, 2018
  • 2September, 2017
Available data
  • 102bam
  • 102fastq
  • 97bigWig
  • 88bed narrowPeak
  • 49bigBed narrowPeak
  • 12bed bed3+
  • 9bed broadPeak
  • 8bigBed broadPeak
  • 1tagAlign
Organism
  • 101Homo sapiens
Biosample type
  • 47cell line
  • 31in vitro differentiated cells
  • 16tissue
  • 8primary cell
Organ
  • 49liver
  • 31connective tissue
  • 14pancreas
  • 7brain
  • 4epithelium
  • 4vasculature
  • 2blood vessel
Project
  • 102AMP
Genome assembly (visualization)
  • 100hg19
  • 73GRCh38
Lab
  • 102AMP-T2D consortium
Audit category:
  • 6missing controlled_by
files.read_length!
  • 35
BIOSAMPLE
ASSAY

102 results

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Clear Filters
ChIP-seq
DNase-seq
cell line
HepG247
in vitro differentiated cells
adipocyte31
tissue
islet of Langerhans101
pancreas3
liver2
primary cell
astrocyte of the cerebellum3
brain microvascular endothelial cell2
choroid plexus epithelial cell2
skeletal muscle myoblast1
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