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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 101ChIP-seq
  • 1DNase-seq
Assay category
  • 101DNA binding
  • 1DNA accessibility
Target of assay
  • 52transcription factor
  • 36histone
  • 36histone modification
  • 18broad histone mark
  • 18narrow histone mark
  • 13RNA binding protein
  • 13control
  • 1chromatin remodeller
  • 1other context
  • 1other post-translational modification
Date released
  • 54November, 2017
  • 44August, 2017
  • 2October, 2018
  • 2September, 2017
Available data
  • 102bam
  • 102fastq
  • 97bigWig
  • 89bed narrowPeak
  • 50bigBed narrowPeak
  • 12bed bed3+
  • 7bed broadPeak
  • 6bigBed broadPeak
  • 3tar
  • 1tagAlign
Organism
  • 101Homo sapiens
Biosample type
  • 51cell line
  • 31in vitro differentiated cells
  • 16tissue
  • 4primary cell
Organ
  • 53liver
  • 31connective tissue
  • 14pancreas
  • 7brain
  • epithelium
  • 4vasculature
  • 2blood vessel
Project
  • 102AMP
Genome assembly (visualization)
  • 100hg19
  • 71GRCh38
Lab
  • 102AMP-T2D consortium
Audit category:
  • 6missing controlled_by
organ_slims!
  • epithelium
BIOSAMPLE
ASSAY

102 results

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Clear Filters
ChIP-seq
DNase-seq
cell line
HepG251
in vitro differentiated cells
adipocyte31
tissue
islet of Langerhans101
pancreas3
liver2
primary cell
astrocyte of the cerebellum3
skeletal muscle myoblast1
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