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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
87
ChIP-seq
1
DNase-seq
Assay category
87
DNA binding
1
DNA accessibility
Target of assay
52
transcription factor
38
histone
38
histone modification
20
narrow histone mark
broad histone mark
15
control
13
RNA binding protein
1
chromatin remodeller
1
other context
1
other post-translational modification
Date released
56
November, 2017
28
August, 2017
2
October, 2018
2
September, 2017
Available data
88
bam
88
fastq
83
bigWig
73
bed narrowPeak
50
bigBed narrowPeak
8
bed bed3+
7
bed broadPeak
6
bigBed broadPeak
3
tar
1
tagAlign
Organism
87
Homo sapiens
Biosample type
49
cell line
19
in vitro differentiated cells
12
tissue
8
primary cell
Organ
51
liver
19
connective tissue
10
pancreas
7
brain
4
epithelium
4
vasculature
2
blood vessel
Project
88
AMP
Genome assembly (visualization)
86
hg19
55
GRCh38
Lab
88
AMP-T2D consortium
Audit category:
6
missing controlled_by
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
88 results
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ChIP-seq
DNase-seq
cell line
HepG2
49
in vitro differentiated cells
adipocyte
19
tissue
islet of Langerhans
6
1
pancreas
3
liver
2
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
skeletal muscle myoblast
1
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