Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 90ChIP-seq
  • 1DNase-seq
Assay category
  • 90DNA binding
  • 1DNA accessibility
Target of assay
  • 52transcription factor
  • 38histone
  • 38histone modification
  • 20narrow histone mark
  • 18broad histone mark
  • control
  • 13RNA binding protein
  • 1chromatin remodeller
  • 1other context
  • 1other post-translational modification
Date released
  • 48November, 2017
  • 42August, 2017
  • 1October, 2018
Available data
  • 91bam
  • 91bed narrowPeak
  • 91bigWig
  • 91fastq
  • 52bigBed narrowPeak
  • 9bed bed3+
  • 9bed broadPeak
  • 8bigBed broadPeak
  • 3tar
  • 1tagAlign
Organism
  • 90Homo sapiens
Biosample type
  • 44cell line
  • 30in vitro differentiated cells
  • 12tissue
  • 5primary cell
Organ
  • 45liver
  • 30connective tissue
  • 11pancreas
  • 4brain
  • 2epithelium
  • 2vasculature
  • 1blood vessel
Project
  • 91AMP
Genome assembly (visualization)
  • 91hg19
  • 70GRCh38
Lab
  • 91AMP-T2D consortium
Audit category:
  • 6missing controlled_by
target.investigated_as!
  • control
BIOSAMPLE
ASSAY

91 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
DNase-seq
cell line
HepG244
in vitro differentiated cells
adipocyte30
tissue
islet of Langerhans81
pancreas2
liver1
primary cell
astrocyte of the cerebellum2
brain microvascular endothelial cell1
choroid plexus epithelial cell1
skeletal muscle myoblast1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego