Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 67ChIP-seq
  • 1DNase-seq
Assay category
  • 67DNA binding
  • 1DNA accessibility
Target of assay
  • 52transcription factor
  • 38histone
  • histone modification
  • 20narrow histone mark
  • 18broad histone mark
  • 15control
  • 13RNA binding protein
  • 1chromatin remodeller
  • 1other context
  • 1other post-translational modification
Date released
  • 52November, 2017
  • 12August, 2017
  • 2October, 2018
  • 2September, 2017
Available data
  • 68bam
  • 68fastq
  • 63bigWig
  • 53bed narrowPeak
  • 45bigBed narrowPeak
  • 5bed bed3+
  • 3tar
  • 2bed broadPeak
  • 2bigBed broadPeak
Organism
  • 68Homo sapiens
Biosample type
  • 48cell line
  • 8tissue
  • 7in vitro differentiated cells
  • 5primary cell
Organ
  • 50liver
  • 7connective tissue
  • 6pancreas
  • 4brain
  • 2epithelium
  • 2vasculature
  • 1blood vessel
Project
  • 68AMP
Genome assembly (visualization)
  • 66hg19
  • 35GRCh38
Lab
  • 68AMP-T2D consortium
Audit category:
  • 5missing controlled_by
target.investigated_as!
  • histone modification
BIOSAMPLE
ASSAY

68 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
DNase-seq
cell line
HepG248
tissue
islet of Langerhans31
liver2
pancreas2
in vitro differentiated cells
adipocyte7
primary cell
astrocyte of the cerebellum2
brain microvascular endothelial cell1
choroid plexus epithelial cell1
skeletal muscle myoblast1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego