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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 85ChIP-seq
  • 1DNase-seq
Assay category
  • 85DNA binding
  • 1DNA accessibility
Target of assay
  • 52transcription factor
  • 38histone
  • 38histone modification
  • narrow histone mark
  • 18broad histone mark
  • 15control
  • 13RNA binding protein
  • 1chromatin remodeller
  • 1other context
  • 1other post-translational modification
Date released
  • 54November, 2017
  • 28August, 2017
  • 2October, 2018
  • 2September, 2017
Available data
  • 86bam
  • 86fastq
  • 81bigWig
  • 71bed narrowPeak
  • 47bigBed narrowPeak
  • 9bed bed3+
  • 4bed broadPeak
  • 4bigBed broadPeak
  • 3tar
Organism
  • 86Homo sapiens
Biosample type
  • 50cell line
  • 19in vitro differentiated cells
  • 12tissue
  • 5primary cell
Organ
  • 52liver
  • 19connective tissue
  • 10pancreas
  • 4brain
  • 2epithelium
  • 2vasculature
  • 1blood vessel
Project
  • 86AMP
Genome assembly (visualization)
  • 84hg19
  • 53GRCh38
Lab
  • 86AMP-T2D consortium
Audit category:
  • 5missing controlled_by
target.investigated_as!
  • narrow histone mark
BIOSAMPLE
ASSAY

86 results

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ChIP-seq
DNase-seq
cell line
HepG250
in vitro differentiated cells
adipocyte19
tissue
islet of Langerhans71
liver2
pancreas2
primary cell
astrocyte of the cerebellum2
brain microvascular endothelial cell1
choroid plexus epithelial cell1
skeletal muscle myoblast1
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