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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
104
ChIP-seq
1
DNase-seq
Assay category
104
DNA binding
1
DNA accessibility
Target of assay
52
transcription factor
38
histone
38
histone modification
20
narrow histone mark
18
broad histone mark
15
control
13
RNA binding protein
1
chromatin remodeller
1
other context
other post-translational modification
Date released
57
November, 2017
44
August, 2017
2
October, 2018
2
September, 2017
Available data
105
bam
105
fastq
100
bigWig
90
bed narrowPeak
51
bigBed narrowPeak
12
bed bed3+
9
bed broadPeak
8
bigBed broadPeak
3
tar
1
tagAlign
Organism
104
Homo sapiens
Biosample type
50
cell line
31
in vitro differentiated cells
16
tissue
8
primary cell
Organ
52
liver
31
connective tissue
14
pancreas
7
brain
4
epithelium
4
vasculature
2
blood vessel
Project
105
AMP
Genome assembly (visualization)
103
hg19
72
GRCh38
Lab
105
AMP-T2D consortium
Audit category:
6
missing controlled_by
target.investigated_as!
other post-translational modification
BIOSAMPLE
ASSAY
105 results
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ChIP-seq
DNase-seq
cell line
HepG2
50
in vitro differentiated cells
adipocyte
31
tissue
islet of Langerhans
10
1
pancreas
3
liver
2
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
skeletal muscle myoblast
1
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