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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 53ChIP-seq
  • 1DNase-seq
Assay category
  • 53DNA binding
  • 1DNA accessibility
Target of assay
  • transcription factor
  • 38histone
  • 38histone modification
  • 20narrow histone mark
  • 18broad histone mark
  • 15control
  • 13RNA binding protein
  • 1chromatin remodeller
  • 1other context
  • 1other post-translational modification
Date released
  • 35August, 2017
  • 16November, 2017
  • 2September, 2017
  • 1October, 2018
Available data
  • 54bam
  • 54fastq
  • 49bigWig
  • 39bed narrowPeak
  • 10bed bed3+
  • 8bigBed narrowPeak
  • 7bed broadPeak
  • 6bigBed broadPeak
  • 1tagAlign
Organism
  • 53Homo sapiens
Biosample type
  • 25in vitro differentiated cells
  • 13tissue
  • 10cell line
  • 6primary cell
Organ
  • 25connective tissue
  • 12pancreas
  • 11liver
  • 6brain
  • 4epithelium
  • 4vasculature
  • 2blood vessel
Project
  • 54AMP
Genome assembly (visualization)
  • 52hg19
  • 42GRCh38
Lab
  • 54AMP-T2D consortium
Audit category:
  • 1missing controlled_by
target.investigated_as!
  • transcription factor
BIOSAMPLE
ASSAY

54 results

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Clear Filters
ChIP-seq
DNase-seq
in vitro differentiated cells
adipocyte25
tissue
islet of Langerhans91
pancreas2
liver1
cell line
HepG210
primary cell
astrocyte of the cerebellum2
brain microvascular endothelial cell2
choroid plexus epithelial cell2
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