Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 17ChIP-seq
  • 1DNase-seq
Assay category
  • 17DNA binding
  • 1DNA accessibility
Target of assay
  • 8histone
  • 8histone modification
  • 5broad histone mark
  • 5control
  • 4transcription factor
  • 3RNA binding protein
  • 3narrow histone mark
Date released
  • 6August, 2017
  • 4November, 2017
  • 4October, 2017
  • 4September, 2017
Available data
  • 18fastq
  • 17bam
  • 12bed narrowPeak
  • 12bigWig
  • 8bigBed narrowPeak
  • 7bed broadPeak
  • 5bigBed broadPeak
  • 5tagAlign
  • 3bed bed3+
Organism
  • 18Homo sapiens
Biosample type
  • 13tissue
  • 3primary cell
  • 2cell line
Organ
  • 7pancreas
  • 6brain
  • 4liver
  • 2epithelium
  • 2vasculature
  • 1blood vessel
Project
  • 18AMP
Genome assembly (visualization)
  • 12hg19
  • 10GRCh38
Lab
  • 18AMP-T2D consortium
Audit category:
  • 4missing controlled_by
Audit category:
  • 1inconsistent control read length
BIOSAMPLE
ASSAY

18 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
DNase-seq
tissue
islet of Langerhans7
brain4
liver2
primary cell
brain microvascular endothelial cell1
choroid plexus epithelial cell1
skeletal muscle myoblast1
cell line
HepG22
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego