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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 21ChIP-seq
  • 1DNase-seq
Assay category
  • 21DNA binding
  • 1DNA accessibility
Target of assay
  • 8control
  • 8transcription factor
  • 5histone
  • 5histone modification
  • 3RNA binding protein
  • 2broad histone mark
  • 2narrow histone mark
Date released
  • 13August, 2017
  • 5November, 2017
  • October, 2017
  • 4September, 2017
Available data
  • 22bam
  • 22fastq
  • 15bigWig
  • 14bed narrowPeak
  • 5bed broadPeak
  • 5bigBed broadPeak
  • 5bigBed narrowPeak
  • 4bed bed3+
  • 1tagAlign
Organism
  • 22Homo sapiens
Biosample type
  • 9tissue
  • 7in vitro differentiated cells
  • 3cell line
  • 3primary cell
Organ
  • 7connective tissue
  • 7pancreas
  • 5liver
  • 2brain
  • 2epithelium
  • 2vasculature
  • 1blood vessel
Project
  • 22AMP
Genome assembly (visualization)
  • 15hg19
  • 12GRCh38
Lab
  • 22AMP-T2D consortium
Audit category:
  • 1inconsistent control read length
month_released!
  • October, 2017
BIOSAMPLE
ASSAY

22 results

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Clear Filters
ChIP-seq
DNase-seq
tissue
islet of Langerhans7
liver2
in vitro differentiated cells
adipocyte7
cell line
HepG23
primary cell
brain microvascular endothelial cell1
choroid plexus epithelial cell1
skeletal muscle myoblast1
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