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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 19ChIP-seq
  • 1DNase-seq
Assay category
  • 19DNA binding
  • 1DNA accessibility
Target of assay
  • 8control
  • 6transcription factor
  • 5histone
  • 5histone modification
  • 2broad histone mark
  • 2narrow histone mark
  • 1RNA binding protein
Date released
  • 13August, 2017
  • 4September, 2017
  • 3November, 2017
Available data
  • 20bam
  • 20fastq
  • 13bigWig
  • 12bed narrowPeak
  • 4bed bed3+
  • 3bed broadPeak
  • 3bigBed broadPeak
  • 3bigBed narrowPeak
  • 1tagAlign
Organism
  • 20Homo sapiens
Biosample type
  • 9tissue
  • 7in vitro differentiated cells
  • 3cell line
  • 1primary cell
Organ
  • 7connective tissue
  • 7pancreas
  • brain
  • 5liver
  • 2epithelium
  • 2vasculature
  • 1blood vessel
Project
  • 20AMP
Genome assembly (visualization)
  • 13hg19
  • 10GRCh38
Lab
  • 20AMP-T2D consortium
Audit category:
  • 1inconsistent control read length
organ_slims!
  • brain
BIOSAMPLE
ASSAY

20 results

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Clear Filters
ChIP-seq
DNase-seq
tissue
islet of Langerhans7
liver2
in vitro differentiated cells
adipocyte7
cell line
HepG23
primary cell
skeletal muscle myoblast1
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