Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 20ChIP-seq
  • 1DNase-seq
Assay category
  • 20DNA binding
  • 1DNA accessibility
Target of assay
  • 8histone
  • 8histone modification
  • 6control
  • 6transcription factor
  • 4broad histone mark
  • 3narrow histone mark
  • 2RNA binding protein
Date released
  • 11August, 2017
  • 4October, 2017
  • 4September, 2017
  • 2November, 2017
Available data
  • 21fastq
  • 20bam
  • 14bed narrowPeak
  • 14bigWig
  • 6bigBed narrowPeak
  • 5bed broadPeak
  • 4tagAlign
  • 3bed bed3+
  • 3bigBed broadPeak
Organism
  • 21Homo sapiens
Biosample type
  • 11tissue
  • 7in vitro differentiated cells
  • 3primary cell
Organ
  • 7connective tissue
  • 7pancreas
  • 6brain
  • liver
  • 2epithelium
  • 2vasculature
  • 1blood vessel
Project
  • 21AMP
Genome assembly (visualization)
  • 14hg19
  • 13GRCh38
Lab
  • 21AMP-T2D consortium
Audit category:
  • 4missing controlled_by
organ_slims!
  • liver
BIOSAMPLE
ASSAY

21 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
DNase-seq
tissue
islet of Langerhans7
brain4
in vitro differentiated cells
adipocyte7
primary cell
brain microvascular endothelial cell1
choroid plexus epithelial cell1
skeletal muscle myoblast1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego