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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 8ChIP-seq
  • 1DNase-seq
Assay category
  • 8DNA binding
  • 1DNA accessibility
Target of assay
  • 5transcription factor
  • 3RNA binding protein
  • 3histone
  • 3histone modification
  • 2broad histone mark
  • 1narrow histone mark
Date released
  • 5August, 2017
  • 4November, 2017
Available data
  • 9bam
  • 9bed narrowPeak
  • 9bigWig
  • 9fastq
  • 5bed broadPeak
  • 5bigBed broadPeak
  • 5bigBed narrowPeak
  • 4bed bed3+
  • 1tagAlign
Organism
  • 9Homo sapiens
Biosample type
  • 3primary cell
  • 3tissue
  • 2cell line
  • 1in vitro differentiated cells
Organ
  • 3liver
  • 2brain
  • 2epithelium
  • 2pancreas
  • 2vasculature
  • 1blood vessel
  • 1connective tissue
Project
  • 9AMP
Genome assembly (visualization)
  • 9hg19
  • 7GRCh38
Lab
  • 9AMP-T2D consortium
Audit category:
  • 1inconsistent control read length
replication_type!
  • unreplicated
BIOSAMPLE
ASSAY

9 results

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Clear Filters
ChIP-seq
DNase-seq
primary cell
brain microvascular endothelial cell1
choroid plexus epithelial cell1
skeletal muscle myoblast1
tissue
islet of Langerhans2
liver1
cell line
HepG22
in vitro differentiated cells
adipocyte1
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