Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 22ChIP-seq
  • 1DNase-seq
Assay category
  • 22DNA binding
  • 1DNA accessibility
Target of assay
  • 9histone
  • 9histone modification
  • 8control
  • 8transcription factor
  • 5broad histone mark
  • 3RNA binding protein
  • narrow histone mark
Date released
  • 11August, 2017
  • 5November, 2017
  • 4September, 2017
  • 3October, 2017
Available data
  • 23fastq
  • 22bam
  • 15bigWig
  • 14bed narrowPeak
  • 7bigBed narrowPeak
  • 6bed broadPeak
  • 5bigBed broadPeak
  • 4tagAlign
  • 3bed bed3+
Organism
  • 23Homo sapiens
Biosample type
  • 10tissue
  • 7in vitro differentiated cells
  • 3cell line
  • 3primary cell
Organ
  • 7connective tissue
  • 5brain
  • 5liver
  • 5pancreas
  • 2epithelium
  • 2vasculature
  • 1blood vessel
Project
  • 23AMP
Genome assembly (visualization)
  • 15hg19
  • 12GRCh38
Lab
  • 23AMP-T2D consortium
Audit category:
  • 3missing controlled_by
Audit category:
  • 1inconsistent control read length
target.investigated_as!
  • narrow histone mark
BIOSAMPLE
ASSAY

23 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
DNase-seq
tissue
islet of Langerhans5
brain3
liver2
in vitro differentiated cells
adipocyte7
cell line
HepG23
primary cell
brain microvascular endothelial cell1
choroid plexus epithelial cell1
skeletal muscle myoblast1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego