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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 9total RNA-seq
  • 8ChIP-seq
Assay category
  • 9Transcription
  • 8DNA binding
Target of assay
  • 7histone
  • 7histone modification
  • 6narrow histone mark
  • 1RNA binding protein
  • 1broad histone mark
  • 1transcription factor
Date released
  • 11February, 2018
  • 6August, 2017
Available data
  • 17bam
  • 17bigWig
  • 17fastq
  • 9tsv
  • 6bed narrowPeak
  • 2bed bed3+
Organism
  • 17Homo sapiens
Biosample type
  • 11in vitro differentiated cells
  • 4primary cell
  • 2tissue
Organ
  • 6pancreas
  • 4epithelium
  • 3embryo
Project
  • 17AMP
Genome assembly (visualization)
  • 17GRCh38
  • 17hg19
Lab
  • 17AMP-T2D consortium
Audit category:
  • 2missing controlled_by
Audit category:
  • 6inconsistent control read length
files.read_length!
  • 36
BIOSAMPLE
ASSAY

17 results

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Clear Filters
total RNA-seq
ChIP-seq
in vitro differentiated cells
definitive endodermal cell12
pancreatic endoderm3
endocrine cell2
embryonic stem cell1
posterior foregut1
primary cell
pancreatic alpha cell2
pancreatic beta cell2
tissue
islet of Langerhans2
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