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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 90ChIP-seq
  • 9total RNA-seq
Assay category
  • 90DNA binding
  • 9Transcription
Target of assay
  • 51transcription factor
  • 23histone
  • 23histone modification
  • 16control
  • 12broad histone mark
  • 11narrow histone mark
  • 6RNA binding protein
  • 5chromatin remodeller
  • 1other context
  • 1other post-translational modification
Date released
  • 59November, 2017
  • August, 2017
  • 33February, 2018
  • 3December, 2017
  • 2November, 2018
  • 1January, 2019
  • 1October, 2017
Available data
  • 99fastq
  • 98bam
  • 86bigWig
  • 71bed narrowPeak
  • 55bigBed narrowPeak
  • 44bed broadPeak
  • 44bigBed broadPeak
  • 9tsv
  • 7tagAlign
Organism
  • 99Homo sapiens
Biosample type
  • 62cell line
  • 33in vitro differentiated cells
  • 4tissue
Organ
  • 64liver
  • 12embryo
  • 1blood
  • 1bodily fluid
  • 1brain
Project
  • 99AMP
Genome assembly (visualization)
  • 86hg19
  • 72GRCh38
Lab
  • 99AMP-T2D consortium
Audit category:
  • 10inconsistent control read length
month_released!
  • August, 2017
BIOSAMPLE
ASSAY

99 results

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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG261
GM128781
in vitro differentiated cells
pancreatic endoderm93
endocrine cell32
definitive endodermal cell31
embryonic stem cell31
posterior foregut31
tissue
liver3
brain1
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