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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 38ChIP-seq
  • 4RRBS
  • 1DNase-seq
Assay category
  • 38DNA binding
  • 4DNA methylation
  • 1DNA accessibility
Target of assay
  • 24histone
  • 24histone modification
  • 13control
  • 12broad histone mark
  • 12narrow histone mark
  • 1RNA binding protein
  • 1transcription factor
Date released
  • 59November, 2017
  • 43August, 2017
  • 33February, 2018
  • 3December, 2017
  • 2November, 2018
  • 1January, 2019
  • 1October, 2017
Available data
  • 43fastq
  • 39bam
  • 27bigWig
  • 23bed narrowPeak
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 9bigBed narrowPeak
  • 9tagAlign
  • 4bed bedMethyl
  • 4bigBed bedMethyl
  • 3bed bed3+
Organism
  • 43Homo sapiens
Biosample type
  • 37primary cell
  • 6tissue
Organ
  • 29pancreas
  • 26epithelium
  • 2musculature of body
  • 1liver
Project
  • 43AMP
Genome assembly (visualization)
  • 31hg19
  • 25GRCh38
Lab
  • 43AMP-T2D consortium
Audit category:
  • 3missing controlled_by
Audit category:
  • 4inconsistent control read length
BIOSAMPLE
ASSAY

43 results

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Clear Filters
ChIP-seq
RRBS
DNase-seq
primary cell
pancreatic alpha cell13
pancreatic beta cell13
skeletal muscle myoblast911
tissue
islet of Langerhans3
skeletal muscle tissue2
liver1
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