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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 24ChIP-seq
Assay category
  • 24DNA binding
Target of assay
  • 52transcription factor
  • 47histone
  • 47histone modification
  • 29control
  • 24broad histone mark
  • 23narrow histone mark
  • 7RNA binding protein
  • 5chromatin remodeller
  • 1other context
  • 1other post-translational modification
Date released
  • 12August, 2017
  • 8February, 2018
  • 4November, 2017
Available data
  • 24bam
  • 24bigWig
  • 24fastq
  • 22bed narrowPeak
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 9tagAlign
  • 8bigBed narrowPeak
  • 1bed bed3+
Organism
  • 24Homo sapiens
Biosample type
  • 11primary cell
  • 8in vitro differentiated cells
  • 4cell line
  • 1tissue
Organ
  • 7pancreas
  • 6epithelium
  • 4liver
  • 3embryo
Project
  • 24AMP
Genome assembly (visualization)
  • 24hg19
  • 23GRCh38
Lab
  • 24AMP-T2D consortium
Audit category:
  • 1missing controlled_by
Audit category:
  • 5inconsistent control read length
BIOSAMPLE
ASSAY

24 results

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Clear Filters
ChIP-seq
primary cell
skeletal muscle myoblast5
pancreatic alpha cell3
pancreatic beta cell3
in vitro differentiated cells
pancreatic endoderm3
definitive endodermal cell1
embryonic stem cell1
endocrine cell1
posterior foregut1
cell line
HepG24
tissue
islet of Langerhans1
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