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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 47ChIP-seq
Assay category
  • 47DNA binding
Target of assay
  • 52transcription factor
  • 47histone
  • 47histone modification
  • 29control
  • 24broad histone mark
  • 23narrow histone mark
  • 7RNA binding protein
  • 5chromatin remodeller
  • 1other context
  • 1other post-translational modification
Date released
  • 24August, 2017
  • 16February, 2018
  • 7November, 2017
Available data
  • 47bam
  • 47bigWig
  • 47fastq
  • 43bed narrowPeak
  • 15bed broadPeak
  • 15bigBed broadPeak
  • 15tagAlign
  • 13bigBed narrowPeak
  • 2bed bed3+
Organism
  • 47Homo sapiens
Biosample type
  • 22primary cell
  • 16in vitro differentiated cells
  • 7cell line
  • 2tissue
Organ
  • 16pancreas
  • 14epithelium
  • 7liver
  • 6embryo
Project
  • 47AMP
Genome assembly (visualization)
  • 47hg19
  • 45GRCh38
Lab
  • 47AMP-T2D consortium
Audit category:
  • 2missing controlled_by
Audit category:
  • 13inconsistent control read length
BIOSAMPLE
ASSAY

47 results

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Clear Filters
ChIP-seq
primary cell
skeletal muscle myoblast8
pancreatic alpha cell7
pancreatic beta cell7
in vitro differentiated cells
pancreatic endoderm6
definitive endodermal cell2
embryonic stem cell2
endocrine cell2
posterior foregut2
cell line
HepG27
tissue
islet of Langerhans2
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