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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 23ChIP-seq
Assay category
  • 23DNA binding
Target of assay
  • 52transcription factor
  • 47histone
  • 47histone modification
  • 29control
  • 24broad histone mark
  • 23narrow histone mark
  • 7RNA binding protein
  • 5chromatin remodeller
  • 1other context
  • 1other post-translational modification
Date released
  • 12August, 2017
  • 8February, 2018
  • 3November, 2017
Available data
  • 23bam
  • 23bigWig
  • 23fastq
  • 21bed narrowPeak
  • 6bed broadPeak
  • 6bigBed broadPeak
  • 6tagAlign
  • 5bigBed narrowPeak
  • 1bed bed3+
Organism
  • 23Homo sapiens
Biosample type
  • 11primary cell
  • 8in vitro differentiated cells
  • 3cell line
  • 1tissue
Organ
  • 9pancreas
  • 8epithelium
  • 3embryo
  • 3liver
Project
  • 23AMP
Genome assembly (visualization)
  • 23hg19
  • 22GRCh38
Lab
  • 23AMP-T2D consortium
Audit category:
  • 1missing controlled_by
Audit category:
  • 8inconsistent control read length
BIOSAMPLE
ASSAY

23 results

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Clear Filters
ChIP-seq
primary cell
pancreatic alpha cell4
pancreatic beta cell4
skeletal muscle myoblast3
in vitro differentiated cells
pancreatic endoderm3
definitive endodermal cell1
embryonic stem cell1
endocrine cell1
posterior foregut1
cell line
HepG23
tissue
islet of Langerhans1
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