Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 58ChIP-seq
  • 14total RNA-seq
  • 3ATAC-seq
Assay category
  • 58DNA binding
  • 14Transcription
  • 3DNA accessibility
Target of assay
  • 50transcription factor
  • 8control
  • 6RNA binding protein
  • 2chromatin remodeller
Date released
  • 30November, 2017
  • 14February, 2018
  • 9November, 2018
  • 7August, 2017
  • 7October, 2018
  • 3December, 2018
  • 3October, 2017
  • 2January, 2019
Available data
  • 75bam
  • 75fastq
  • 67bigWig
  • 46bed narrowPeak
  • 43bigBed narrowPeak
  • 14tsv
  • 2bed bed3+
Organism
  • 75Homo sapiens
Biosample type
  • 44cell line
  • 17tissue
  • 14in vitro differentiated cells
Organ
  • 33liver
  • 12adipose tissue
  • 12connective tissue
  • 11blood
  • 11bodily fluid
  • 5pancreas
  • 4embryo
Project
  • 75AMP
Genome assembly (visualization)
  • 67GRCh38
  • 67hg19
Lab
  • 75AMP-T2D consortium
Audit category:
  • 7missing controlled_by
BIOSAMPLE
ASSAY

75 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
cell line
HepG233
GM1287811
tissue
white adipose tissue7
body of pancreas23
subcutaneous adipose tissue5
in vitro differentiated cells
pancreatic endoderm4
definitive endodermal cell2
embryonic stem cell2
posterior foregut2
primitive gut cell2
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego