Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 123total RNA-seq
  • 7ChIP-seq
  • 1DNase-seq
Assay category
  • 123Transcription
  • 7DNA binding
  • 1DNA accessibility
Target of assay
  • 7transcription factor
Date released
  • 93August, 2017
  • 26September, 2018
  • 6February, 2018
  • 2November, 2017
  • 2October, 2018
  • 1December, 2018
  • 1November, 2018
Available data
  • 131bam
  • 131bigWig
  • 131fastq
  • 123tsv
  • 5bed narrowPeak
  • 5bigBed narrowPeak
  • 1bed broadPeak
  • 1bigBed broadPeak
Organism
  • 131Homo sapiens
Biosample type
  • 92tissue
  • 29primary cell
  • 6in vitro differentiated cells
  • 4cell line
Organ
  • 117pancreas
  • 28epithelium
  • 3adipose tissue
  • 3connective tissue
  • 2blood
  • 2bodily fluid
  • 2liver
  • 1embryo
Project
  • 131AMP
Genome assembly (visualization)
  • 131hg19
  • 130GRCh38
Lab
  • 131AMP-T2D consortium
Audit category:
  • 3missing controlled_by
BIOSAMPLE
ASSAY

131 results

search-icontable-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
tissue
islet of Langerhans89
white adipose tissue3
primary cell
pancreatic alpha cell10
pancreatic beta cell10
pancreatic acinar cell4
pancreatic ductal cell4
skeletal muscle myoblast1
in vitro differentiated cells
definitive endodermal cell1
embryonic stem cell1
endocrine cell1
pancreatic endoderm1
posterior foregut1
cell line
GM128782
HepG22
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego