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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 28total RNA-seq
  • 21ChIP-seq
  • 15single cell RNA-seq
  • 14ATAC-seq
Assay category
  • 43Transcription
  • 21DNA binding
  • 14DNA accessibility
Target of assay
  • 21histone
  • 21histone modification
  • 11narrow histone mark
  • 10broad histone mark
Date released
  • 61September, 2018
  • 14July, 2018
  • 2October, 2018
  • 1August, 2018
Available data
  • 78bam
  • 78bigWig
  • 78fastq
  • 43tsv
  • 35bed narrowPeak
  • 14bigBed narrowPeak
Organism
  • 78Homo sapiens
Biosample type
  • 78primary cell
Organ
  • 262liver
  • 219pancreas
  • 78epithelium
  • 32connective tissue
  • 27adipose tissue
  • 16blood
  • 16bodily fluid
  • 6spleen
  • 5brain
  • 4embryo
Project
  • 78AMP
Genome assembly (visualization)
  • 78GRCh38
  • 78hg19
Lab
  • 78AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
Audit category:
  • 21missing controlled_by
BIOSAMPLE
ASSAY

78 results

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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
ATAC-seq
primary cell
pancreatic ductal cell41324
pancreatic acinar cell4843
pancreatic beta cell1024
pancreatic alpha cell1013
endothelial cell2
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