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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 38ChIP-seq
Assay category
  • 38DNA binding
Target of assay
  • 229transcription factor
  • 82recombinant protein
  • 76control
  • 69histone
  • 69histone modification
  • 38broad histone mark
  • 31narrow histone mark
  • 26RNA binding protein
  • 9chromatin remodeller
  • 3other context
  • 3other post-translational modification
Date released
  • 17August, 2017
  • 17September, 2018
  • 3October, 2017
  • 1November, 2017
Available data
  • 38bam
  • 38bigWig
  • 38fastq
  • 34bed narrowPeak
  • 16bigBed narrowPeak
  • 8tagAlign
  • 6bed broadPeak
  • 1bigBed broadPeak
Organism
  • 34Homo sapiens
Biosample type
  • 21primary cell
  • 16tissue
  • 1cell line
Organ
  • 29pancreas
  • 10epithelium
  • 6liver
  • 3brain
Project
  • 38AMP
Genome assembly (visualization)
  • 38GRCh38
  • 38hg19
Lab
  • 38AMP-T2D consortium
Audit category:
  • 21missing controlled_by
Audit category:
  • 4inconsistent control read length
  • 1inconsistent assembly
BIOSAMPLE
ASSAY

38 results

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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell11
pancreatic ductal cell6
pancreatic acinar cell4
tissue
pancreas8
liver5
brain3
cell line
HepG21
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