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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 69ChIP-seq
Assay category
  • 69DNA binding
Target of assay
  • 229transcription factor
  • 82recombinant protein
  • 76control
  • 69histone
  • 69histone modification
  • 38broad histone mark
  • 31narrow histone mark
  • 26RNA binding protein
  • 9chromatin remodeller
  • 3other context
  • 3other post-translational modification
Date released
  • 33August, 2017
  • 32September, 2018
  • 3October, 2017
  • 1November, 2017
Available data
  • 69bam
  • 69bigWig
  • 69fastq
  • 56bed narrowPeak
  • 21bigBed narrowPeak
  • 9tagAlign
  • 7bed broadPeak
  • 1bed bed3+
  • 1bigBed broadPeak
Organism
  • 64Homo sapiens
Biosample type
  • 45primary cell
  • 23tissue
  • 1cell line
Organ
  • 56pancreas
  • 21epithelium
  • 8liver
  • 3brain
  • 1adipose tissue
  • 1connective tissue
Project
  • 69AMP
Genome assembly (visualization)
  • 69GRCh38
  • 69hg19
Lab
  • 69AMP-T2D consortium
Audit category:
  • 45missing controlled_by
Audit category:
  • 6inconsistent control read length
  • 2inconsistent assembly
  • 1inconsistent control run_type
BIOSAMPLE
ASSAY

69 results

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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell23
pancreatic ductal cell13
pancreatic acinar cell8
skeletal muscle myoblast1
tissue
pancreas11
liver7
brain3
adipose tissue1
islet of Langerhans1
cell line
HepG21
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