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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 31ChIP-seq
Assay category
  • 31DNA binding
Target of assay
  • 229transcription factor
  • 82recombinant protein
  • 76control
  • 69histone
  • 69histone modification
  • 38broad histone mark
  • 31narrow histone mark
  • 26RNA binding protein
  • 9chromatin remodeller
  • 3other context
  • 3other post-translational modification
Date released
  • 16August, 2017
  • 15September, 2018
Available data
  • 31bam
  • 31bigWig
  • 31fastq
  • 22bed narrowPeak
  • 5bigBed narrowPeak
  • 1bed bed3+
  • 1bed broadPeak
  • 1tagAlign
Organism
  • 30Homo sapiens
Biosample type
  • 24primary cell
  • 7tissue
Organ
  • 27pancreas
  • 11epithelium
  • 2liver
  • 1adipose tissue
  • 1connective tissue
Project
  • 31AMP
Genome assembly (visualization)
  • 31GRCh38
  • 31hg19
Lab
  • 31AMP-T2D consortium
Audit category:
  • 24missing controlled_by
Audit category:
  • 2inconsistent control read length
  • 1inconsistent assembly
  • 1inconsistent control run_type
BIOSAMPLE
ASSAY

31 results

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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell12
pancreatic ductal cell7
pancreatic acinar cell4
skeletal muscle myoblast1
tissue
pancreas3
liver2
adipose tissue1
islet of Langerhans1
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