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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 229ChIP-seq
Assay category
  • 229DNA binding
Target of assay
  • 229transcription factor
  • 82recombinant protein
  • 76control
  • 69histone
  • 69histone modification
  • 38broad histone mark
  • 31narrow histone mark
  • 26RNA binding protein
  • 9chromatin remodeller
  • 3other context
  • 3other post-translational modification
Date released
  • 130November, 2017
  • 44November, 2018
  • 27December, 2017
  • 18August, 2017
  • 4January, 2019
  • 3December, 2018
  • 3October, 2018
Available data
  • 229bam
  • 229fastq
  • 225bigWig
  • 204bed narrowPeak
  • 203bigBed narrowPeak
  • 10bed bed3+
  • 5bed broadPeak
  • 5bigBed broadPeak
Organism
  • 229Homo sapiens
Biosample type
  • 174cell line
  • 54tissue
  • 1in vitro differentiated cells
Organ
  • 193liver
  • 15connective tissue
  • 14adipose tissue
  • 12blood
  • 12bodily fluid
  • 6pancreas
  • 3spleen
Project
  • 229AMP
Genome assembly (visualization)
  • 222hg19
  • 221GRCh38
Lab
  • 229AMP-T2D consortium
Audit category:
  • 27inconsistent control
Audit category:
  • 18missing controlled_by
Audit category:
  • 5inconsistent control read length
BIOSAMPLE
ASSAY

229 results

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Clear Filters
ChIP-seq
cell line
HepG2162
GM1287812
tissue
liver31
white adipose tissue12
islet of Langerhans5
spleen3
subcutaneous adipose tissue2
in vitro differentiated cells
adipocyte1
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