Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
2
DNase-seq
Assay category
36
DNA binding
2
DNA accessibility
Target of assay
15
histone
15
histone modification
14
transcription factor
10
chromatin remodeller
10
narrow histone mark
7
control
5
broad histone mark
4
RNA binding protein
Date released
23
December, 2017
7
November, 2017
7
November, 2018
1
August, 2017
Available data
38
bam
38
fastq
30
bed narrowPeak
30
bigWig
16
bed bed3+
14
bigBed narrowPeak
2
bed broadPeak
2
bigBed broadPeak
Organism
38
Homo sapiens
Biosample type
21
in vitro differentiated cells
12
cell line
3
tissue
2
stem cell
Organ
14
liver
9
embryo
3
epithelium
1
brain
Project
38
AMP
Genome assembly (visualization)
35
hg19
33
GRCh38
Lab
38
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
8
missing controlled_by
Audit category:
16
inconsistent control read length
8
inconsistent control run_type
BIOSAMPLE
ASSAY
38 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
in vitro differentiated cells
pancreatic endoderm
6
Posterior foregut
4
definitive endodermal cell
4
primitive gut cell
4
Hepatic endoderm
3
cell line
HepG2
12
tissue
liver
1
1
brain
1
stem cell
hESC
2
Download