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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 62ChIP-seq
Assay category
  • 62DNA binding
Target of assay
  • 41histone
  • 41histone modification
  • 25broad histone mark
  • 16narrow histone mark
  • 12transcription factor
  • 10chromatin remodeller
  • 9control
  • 8RNA binding protein
Date released
  • 21December, 2017
  • 21October, 2018
  • 12January, 2019
  • 3November, 2017
  • 3November, 2018
  • 2December, 2018
Available data
  • 62bam
  • 62fastq
  • 53bed narrowPeak
  • 53bigBed narrowPeak
  • 53bigWig
Organism
  • 62Homo sapiens
Biosample type
  • 34tissue
  • 15in vitro differentiated cells
  • 13cell line
Organ
  • 24liver
  • 20pancreas
  • 15epithelium
  • 10blood
  • 10bodily fluid
  • 7spleen
  • 1adipose tissue
  • 1connective tissue
Project
  • 62AMP
Genome assembly (visualization)
  • 53GRCh38
  • 53hg19
Lab
  • 62AMP-T2D consortium
Audit category:
  • 1inconsistent control
Audit category:
  • 1missing controlled_by
Audit category:
  • 2inconsistent control read length
BIOSAMPLE
ASSAY

62 results

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Clear Filters
ChIP-seq
tissue
body of pancreas20
spleen7
right lobe of liver6
omental fat pad1
in vitro differentiated cells
hepatocyte15
cell line
GM1287810
HepG23
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