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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
single cell RNA-seq
19
ChIP-seq
Assay category
26
Transcription
19
DNA binding
Target of assay
14
histone
14
histone modification
7
broad histone mark
7
narrow histone mark
3
control
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
19
December, 2017
15
April, 2018
9
July, 2018
1
August, 2018
1
June, 2018
Available data
45
bam
45
fastq
42
bigWig
26
tsv
16
bed narrowPeak
14
bigBed narrowPeak
Organism
45
Homo sapiens
Biosample type
26
primary cell
19
in vitro differentiated cells
Organ
62
liver
51
pancreas
45
epithelium
14
embryo
10
blood
10
bodily fluid
9
connective tissue
7
spleen
4
adipose tissue
2
brain
Project
45
AMP
Genome assembly (visualization)
42
GRCh38
42
hg19
Lab
45
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
45 results
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single cell RNA-seq
ChIP-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
pancreatic delta cell
5
pancreatic polypeptide-secreting cell
5
pancreatic ductal cell
3
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in vitro differentiated cells
hepatocyte
15
Hepatic endoderm
4
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