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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 26single cell RNA-seq
  • 22ChIP-seq
  • 2WGBS
  • 1ATAC-seq
Assay category
  • 26Transcription
  • 22DNA binding
  • 2DNA methylation
  • 1DNA accessibility
Target of assay
  • 17histone
  • 17histone modification
  • 11broad histone mark
  • 6narrow histone mark
  • 4control
  • 1RNA binding protein
  • 1transcription factor
Date released
  • 20October, 2018
  • 15April, 2018
  • 9July, 2018
  • 2August, 2017
  • 2November, 2018
  • 1August, 2018
  • 1June, 2018
  • 1March, 2019
Available data
  • 51bam
  • 51fastq
  • 46bigWig
  • 26tsv
  • 18bed narrowPeak
  • 17bigBed narrowPeak
  • 2bed bedMethyl
  • 2bigBed bedMethyl
  • 1bed broadPeak
Organism
  • 51Homo sapiens
Biosample type
  • 26primary cell
  • 25tissue
Organ
  • 62liver
  • 51pancreas
  • 45epithelium
  • 14embryo
  • 10blood
  • 10bodily fluid
  • 9connective tissue
  • 7spleen
  • 4adipose tissue
  • 2brain
Project
  • 51AMP
Genome assembly (visualization)
  • 46GRCh38
  • 44hg19
Lab
  • 50AMP-T2D consortium
  • 1Mark McCarthy, Oxford
Audit category:
  • 1inconsistent control read length
BIOSAMPLE
ASSAY

51 results

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single cell RNA-seq
ChIP-seq
WGBS
ATAC-seq
primary cell
pancreatic alpha cell6
pancreatic beta cell6
pancreatic delta cell5
pancreatic polypeptide-secreting cell5
pancreatic ductal cell3
tissue
body of pancreas20
islet of Langerhans21
pancreas2
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