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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
85
ChIP-seq
Assay category
85
DNA binding
Target of assay
41
transcription factor
33
RNA binding protein
33
histone
33
histone modification
18
chromatin remodeller
17
narrow histone mark
16
broad histone mark
10
control
Date released
32
December, 2017
22
November, 2017
17
November, 2018
7
October, 2018
5
January, 2019
2
December, 2018
Available data
85
bam
85
fastq
74
bed narrowPeak
74
bigWig
64
bigBed narrowPeak
15
bed bed3+
Organism
85
Homo sapiens
Biosample type
46
cell line
27
in vitro differentiated cells
9
tissue
3
stem cell
Organ
55
liver
15
epithelium
8
blood
8
bodily fluid
7
pancreas
3
embryo
Project
85
AMP
Genome assembly (visualization)
78
hg19
77
GRCh38
Lab
85
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
7
missing controlled_by
Audit category:
17
inconsistent control read length
8
inconsistent control run_type
BIOSAMPLE
ASSAY
85 results
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ChIP-seq
cell line
HepG2
38
GM12878
8
in vitro differentiated cells
hepatocyte
15
Posterior foregut
3
definitive endodermal cell
3
pancreatic endoderm
3
primitive gut cell
3
tissue
body of pancreas
7
right lobe of liver
2
stem cell
hESC
3
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