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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 57ChIP-seq
Assay category
  • 57DNA binding
Target of assay
  • 58transcription factor
  • 57histone
  • 57histone modification
  • 35RNA binding protein
  • 30broad histone mark
  • 27narrow histone mark
  • 20chromatin remodeller
  • 20control
Date released
  • 31December, 2017
  • 16October, 2018
  • 7January, 2019
  • 2August, 2017
  • 1November, 2017
Available data
  • 57bam
  • 57fastq
  • 56bed narrowPeak
  • 56bigWig
  • 42bigBed narrowPeak
  • 10bed bed3+
Organism
  • 57Homo sapiens
Biosample type
  • 29tissue
  • 24in vitro differentiated cells
  • 2cell line
  • 2stem cell
Organ
  • 19liver
  • 17pancreas
  • 14epithelium
  • 6embryo
  • 6spleen
  • 1blood
  • 1bodily fluid
Project
  • 57AMP
Genome assembly (visualization)
  • 56GRCh38
  • 56hg19
Lab
  • 57AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
Audit category:
  • 2missing controlled_by
Audit category:
  • 9inconsistent control read length
BIOSAMPLE
ASSAY

57 results

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Clear Filters
ChIP-seq
tissue
body of pancreas16
spleen6
right lobe of liver5
islet of Langerhans1
liver1
in vitro differentiated cells
hepatocyte12
pancreatic endoderm4
Hepatic endoderm2
Posterior foregut2
definitive endodermal cell2
cell line
GM128781
HepG21
stem cell
hESC2
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