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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 27ChIP-seq
Assay category
  • 27DNA binding
Target of assay
  • 58transcription factor
  • 57histone
  • 57histone modification
  • 35RNA binding protein
  • 30broad histone mark
  • 27narrow histone mark
  • 20chromatin remodeller
  • 20control
Date released
  • 16December, 2017
  • 5October, 2018
  • 3January, 2019
  • 2August, 2017
  • 1November, 2017
Available data
  • 27bam
  • 27fastq
  • 26bed narrowPeak
  • 26bigWig
  • 17bigBed narrowPeak
  • 5bed bed3+
Organism
  • 27Homo sapiens
Biosample type
  • 13in vitro differentiated cells
  • 11tissue
  • 2cell line
  • 1stem cell
Organ
  • 9liver
  • 7epithelium
  • 6pancreas
  • 5embryo
  • 2spleen
  • 1blood
  • 1bodily fluid
Project
  • 27AMP
Genome assembly (visualization)
  • 26GRCh38
  • 26hg19
Lab
  • 27AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
Audit category:
  • 2missing controlled_by
Audit category:
  • 4inconsistent control read length
BIOSAMPLE
ASSAY

27 results

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Clear Filters
ChIP-seq
in vitro differentiated cells
hepatocyte5
pancreatic endoderm3
Hepatic endoderm2
Posterior foregut1
definitive endodermal cell1
tissue
body of pancreas5
right lobe of liver2
spleen2
islet of Langerhans1
liver1
cell line
GM128781
HepG21
stem cell
hESC1
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