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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 58ChIP-seq
Assay category
  • 58DNA binding
Target of assay
  • 58transcription factor
  • 57histone
  • 57histone modification
  • 35RNA binding protein
  • 30broad histone mark
  • 27narrow histone mark
  • 20chromatin remodeller
  • 20control
Date released
  • 18November, 2018
  • 17November, 2017
  • 11December, 2017
  • 5August, 2017
  • 4January, 2019
  • 2December, 2018
  • 1October, 2018
Available data
  • 58bam
  • 58fastq
  • 57bigWig
  • 52bed narrowPeak
  • 43bigBed narrowPeak
Organism
  • 58Homo sapiens
Biosample type
  • 41cell line
  • 16in vitro differentiated cells
  • 1tissue
Organ
  • 35liver
  • 8blood
  • 8bodily fluid
  • 5connective tissue
  • 3embryo
  • 2epithelium
  • 1pancreas
Project
  • 58AMP
Genome assembly (visualization)
  • 56hg19
  • 55GRCh38
Lab
  • 58AMP-T2D consortium
Audit category:
  • 1inconsistent control
Audit category:
  • 11missing controlled_by
Audit category:
  • 14inconsistent control read length
  • 8inconsistent control run_type
BIOSAMPLE
ASSAY

58 results

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Clear Filters
ChIP-seq
cell line
HepG233
GM128788
in vitro differentiated cells
adipocyte5
pancreatic endoderm3
Posterior foregut2
definitive endodermal cell2
hepatocyte2
tissue
body of pancreas1
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