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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 77ChIP-seq
  • 23ATAC-seq
  • 22total RNA-seq
Assay category
  • 77DNA binding
  • 23DNA accessibility
  • 22Transcription
Target of assay
  • 56transcription factor
  • 18control
  • 12RNA binding protein
  • 1chromatin remodeller
Date released
  • 29December, 2018
  • 24May, 2022
  • 20October, 2018
  • 16September, 2020
  • 10November, 2017
  • 8November, 2018
  • 6January, 2019
  • 4December, 2017
  • 3October, 2017
  • 2August, 2017
Available data
  • 122fastq
  • 106bam
  • 82bed narrowPeak
  • 64bigWig
  • 61bigBed narrowPeak
  • 6txt
Organism
  • 122Homo sapiens
Biosample type
  • 60tissue
  • 46cell line
  • 16primary cell
Organ
  • 52pancreas
  • 35blood
  • 35bodily fluid
  • 16epithelium
  • 16liver
  • 11adipose tissue
  • 11connective tissue
  • 8spleen
Project
  • 106AMP
  • 16HPAP
Genome assembly (visualization)
  • 82hg19
  • 64GRCh38
Lab
  • 82AMP-T2D consortium
  • 24Kyle Gaulton, UCSD
  • 16Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY

122 results

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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
tissue
islet of Langerhans186
body of pancreas111
spleen71
omental fat pad61
right lobe of liver41
subcutaneous adipose tissue31
cell line
GM1287835
HepG211
primary cell
pancreatic alpha cell15
pancreatic beta cell1
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