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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
ChIP-seq
23
single cell RNA-seq
22
total RNA-seq
21
ATAC-seq
5
DNase-seq
Assay category
68
DNA binding
45
Transcription
26
DNA accessibility
Target of assay
53
transcription factor
12
control
9
RNA binding protein
1
chromatin remodeller
Date released
38
September, 2020
29
December, 2018
24
May, 2022
13
November, 2018
11
October, 2018
10
November, 2017
6
January, 2019
4
December, 2017
2
October, 2017
1
August, 2017
1
July, 2018
Available data
139
fastq
101
bam
82
bed narrowPeak
65
bigWig
62
bigBed narrowPeak
6
txt
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
1
tsv
1
zippedFastqFolder
Organism
139
Homo sapiens
Biosample type
54
tissue
46
cell line
39
primary cell
Organ
55
pancreas
35
blood
35
bodily fluid
18
liver
17
epithelium
13
adipose tissue
connective tissue
9
spleen
Project
101
AMP
38
HPAP
Genome assembly (visualization)
83
hg19
65
GRCh38
Lab
77
AMP-T2D consortium
38
Klaus Kaestner, Upenn
24
Kyle Gaulton, UCSD
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
139 results
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ChIP-seq
single cell RNA-seq
total RNA-seq
ATAC-seq
DNase-seq
tissue
islet of Langerhans
6
18
body of pancreas
11
1
2
spleen
7
1
1
right lobe of liver
4
1
1
liver
1
cell line
GM12878
35
HepG2
11
primary cell
Langerhans cell
22
pancreatic alpha cell
1
15
pancreatic beta cell
1
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