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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 68ChIP-seq
  • 23single cell RNA-seq
  • 22total RNA-seq
  • 21ATAC-seq
  • 5DNase-seq
Assay category
  • 68DNA binding
  • 45Transcription
  • 26DNA accessibility
Target of assay
  • 53transcription factor
  • 12control
  • 9RNA binding protein
  • 1chromatin remodeller
Date released
  • 38September, 2020
  • 29December, 2018
  • 24May, 2022
  • 13November, 2018
  • 11October, 2018
  • 10November, 2017
  • 6January, 2019
  • 4December, 2017
  • 2October, 2017
  • 1August, 2017
  • 1July, 2018
Available data
  • 139fastq
  • 101bam
  • 82bed narrowPeak
  • 65bigWig
  • 62bigBed narrowPeak
  • 6txt
  • 5bed bed3+
  • 5bed broadPeak
  • 5bigBed broadPeak
  • 1tsv
  • 1zippedFastqFolder
Organism
  • 139Homo sapiens
Biosample type
  • 54tissue
  • 46cell line
  • 39primary cell
Organ
  • 55pancreas
  • 35blood
  • 35bodily fluid
  • 18liver
  • 17epithelium
  • 13adipose tissue
  • connective tissue
  • 9spleen
Project
  • 101AMP
  • 38HPAP
Genome assembly (visualization)
  • 83hg19
  • 65GRCh38
Lab
  • 77AMP-T2D consortium
  • 38Klaus Kaestner, Upenn
  • 24Kyle Gaulton, UCSD
organ_slims!
  • connective tissue
BIOSAMPLE
ASSAY

139 results

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Clear Filters
ChIP-seq
single cell RNA-seq
total RNA-seq
ATAC-seq
DNase-seq
tissue
islet of Langerhans618
body of pancreas1112
spleen711
right lobe of liver411
liver1
cell line
GM1287835
HepG211
primary cell
Langerhans cell22
pancreatic alpha cell115
pancreatic beta cell1
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