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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 9ChIP-seq
  • 2ATAC-seq
  • 1DNase-seq
  • 1pCHi-C
Assay category
  • 9DNA binding
  • 3DNA accessibility
Target of assay
  • 6control
  • 3RNA binding protein
  • 3transcription factor
Date released
  • 9October, 2018
  • 1August, 2017
  • 1August, 2018
  • 1November, 2018
  • 1October, 2017
Available data
  • 13fastq
  • 12bam
  • 6bed narrowPeak
  • 6bigWig
  • 5bigBed narrowPeak
  • 1bed bed3+
  • 1bed broadPeak
  • 1bedpe bed3+
  • 1bigBed broadPeak
Organism
  • 13Homo sapiens
Biosample type
  • 12tissue
  • 1in vitro differentiated cells
Organ
  • 55pancreas
  • 35blood
  • 35bodily fluid
  • 18liver
  • 17epithelium
  • 13adipose tissue
  • 13connective tissue
  • 9spleen
Project
  • 13AMP
Genome assembly (visualization)
  • 6GRCh38
  • 6hg19
Lab
  • 13AMP-T2D consortium
BIOSAMPLE
ASSAY

13 results

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ChIP-seq
ATAC-seq
DNase-seq
pCHi-C
tissue
omental fat pad611
subcutaneous adipose tissue31
in vitro differentiated cells
white fat cell1
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