Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 77ChIP-seq
  • 23ATAC-seq
  • 6DNase-seq
  • 1pCHi-C
Assay category
  • 77DNA binding
  • 29DNA accessibility
Target of assay
  • 56transcription factor
  • 18control
  • 12RNA binding protein
  • 1chromatin remodeller
Date released
  • 29December, 2018
  • 20October, 2018
  • 18May, 2022
  • 14November, 2018
  • 10November, 2017
  • 6January, 2019
  • 4December, 2017
  • 3October, 2017
  • 2August, 2017
  • 1August, 2018
Available data
  • 107fastq
  • 106bam
  • 88bed narrowPeak
  • 70bigWig
  • 67bigBed narrowPeak
  • 6bed bed3+
  • 6bed broadPeak
  • 6bigBed broadPeak
  • 1bedpe bed3+
Organism
  • 107Homo sapiens
Biosample type
  • 60tissue
  • 46cell line
  • 1in vitro differentiated cells
Organ
  • 35blood
  • 35bodily fluid
  • 32pancreas
  • 18liver
  • 13adipose tissue
  • 13connective tissue
  • 9spleen
Project
  • 107AMP
Genome assembly (visualization)
  • 88hg19
  • 70GRCh38
Lab
  • 89AMP-T2D consortium
  • 18Kyle Gaulton, UCSD
replicates.library.nucleic_acid_term_name!
  • RNA
BIOSAMPLE
ASSAY

107 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
pCHi-C
tissue
islet of Langerhans18
body of pancreas1112
spleen711
omental fat pad611
right lobe of liver411
cell line
GM1287835
HepG211
in vitro differentiated cells
white fat cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego